1) V. A. Jisna, P. B. Jayaraj, Protein Structure Prediction: Conventional and Deep Learning Perspectives, The Protein Journal (SCIE), Volume=40, Number=4,  https://link.springer.com/article/10.1007/s10930-021-10003-y, May 2021.

2) V. A. Jisna, P. B. Jayaraj, An End-to-End Deep Learning Pipeline for Assigning Secondary Structure in Proteins, Journal of Computational Biophysics and Chemistry (SCIE), Volume=21, Number=03, https://www.worldscientific.com/doi/abs/10.1142/S2737416522500120, January 2022.

3) Jisna Vellara Antony, Prayagh Madhu, Jayaraj Pottekkattuvalappil Balakrishnan, Hemant Yadav, Assigning secondary structure in proteins using AI, Journal of Molecular Modeling (SCIE), Volume=27, Number=9, https://link.springer.com/article/10.1007/s00894-021-04825-x, August 2021.

4) Jisna V. A., Roosafeed Koya, Pournami P. N., Gopakumar G, Jayaraj P. B., Protein Secondary Structure Assignment using Residual Networks, Journal of Molecular Modeling (SCIE), vol. 28, no. 09, pp. 1-10, 2022, https://doi.org/10.1007/s00894-022-05271-z, August 2022.

5) V. A. Jisna, Abhaysing Pawar Ajay, and P. B. Jayaraj, Using Attention-UNet Models to Predict Protein Contact Maps, Journal of Computational Biology 31 (7), 691-702, July 2024.

 

 

2) Jisna V. A., B. Krishna Sri, Echuri Pragna, and Aarushi Sahasra Reddy. Advancing Protein–Protein Interaction Analysis with Graph Convolutional Networks. In the International Conference on Artificial Intelligence for Healthcare (AIHC 2025), December 10–12, 2025, National Institute of Technology Calicut, Kerala, India.

3) Jisna Antony, Akhil Penikalapati, J. Vinod Kumar Reddy, P. N. Pournami, P. B. Jayaraj, Towards Protein Tertiary Structure Prediction Using LSTM/BLSTM, CoCoNet 2020-ACN 2020, The Fourth International Conference on Computing and Network Communications, Vellore Institute of Technology, Chennai, Springer, https://doi.org/10.1007/978-981-33-6987-0_6, October 2020.

4) Jisna Antony, Vishnu Sreenivas, Jayaraj P B, Towards Building a Coordinate Clustered Library for Template-Based Modeling of Protein Structures, 2018 IEEE Recent Advances in Intelligent Computational Systems (RAICS), KTDC Mascot Hotel, Cantonment House Road, PMG, Thiruvananthapuram, Kerala, India, IEEE, DOI: 10.1109/RAICS.2018.8635068, December 2018.